Hey gander,
it is not possible to set a fixed minimum Z height, with no CNC machine, because it depends on the length of the bit, and where you probe Z. But if you always set your workpieze zero coordinate to the bottom of your virtual 3D model, you always probe workpiece zero from the machine bed, which would be the vacuum bed here (flip XÝZ touch plate over in this case, see XYZ touch plate installation & instruction video). In this case the bit end will not go lower than the vacuum plate.
For the protocol: Changed topic title and category accordingly (instead of “Do not pass Z value”, simply “Probe Z from bottom of workpiece”. Category: Topic applies to all types fo CNC machines.)
Welcome to the forum!